Correcting pedigree
From ICISWiki
Contents |
Managing Genealogy Data
Example: Westonia The germplasm we want to update is WESTONIA.
- A search in GMSearch for WESTONIA, brings up GID 2447813 with unknown parents.
- From other literature we found that the pedigree for WESTONIA was CO1190-203 / 84W127-501
- Pedigree for CO1190-203 is SPICA/TIMGALEN//TOSCA
- Pedigree for 84W127-501 is CRANBROOK//JACUP*2/BOBWHITE
Step 1
- >westonia (Search for the germplasm)
- >.1 (Pick the hit and notice that it shows no parents)
- >.fcr SPICA/TIMGALEN//TOSCA (Search for one of the parents by cross)
- 1 CID261218 216687 BCID C2W ? 0
- >.rel (Look for offspring of this parent)
- >.1 (Pick the first relative and look at the tree)
- >.tre 216691
1487WW77 0 216691 2 +-CID261218 0 216687 4 | +-CID261217 0 216685 8 | | +-SPICA 1 7996< 9 | | +-TIMGALEN 0 11825< 5 | +-TOSCA 0 216686 10 | +-II7078 0 351< 11 | +-NEWTHATCH 1 116< 3 +-CID261221 0 216690 6 +-CRANBROOK 1 216637 13 | +-CID7518 0 12658< 14 | +-ZAMBEZI 0 11121< 7 +-CID261220 0 216689 15 +-JACUP 2 160402< 16 +-CID261219 0 216688<
Step 2
- >.16 (Pick the last cross - we want to add a better name)
- >.loc western australia (Find the code for the name location)
- >.name ,3,1228,0,0,jacup/bobwhite (Add the new name)
- >.opt namp=1 (Set options to show all names on the tree)
- >.tre 216691
1487WW77,CID205626 0 216691 2 +-CID261218 0 216687 4 | +-CID261217 0 216685 8 | | +-SPICA,SPC,BW15695 1 7996< 9 | | +-TIMGALEN,TG,BW444,CID6634,W.3128 0 11825< 5 | +-TOSCA,TOSCA,CWI3956,CID247539 0 216686 10 | +-II7078,CID6665 0 351< 11 | +-NEWTHATCH,N,CWI12230 1 116< 3 +-CID261221 0 216690 6 +-CRANBROOK,CRBK,CWI32423,CM8954-0AUS[AUS] 1 216637 13 | +-CID7518 0 12658< 14 | +-ZAMBEZI,ZBZ,BW774,CID5856 0 11121< 7 +-CID261220 0 216689 15 +-JACUP,JACUP,CWI25580 2 160402< 16 +-CID261219,JACUP/BOBWHITE 0 216688<
- >.7 (Add a name to the row numbered 7 also)
- >.name ,3,1228,0,0,jacup*2/bobwhite
Step 3
- >.3 (Add a cross name to the line numbered 3 in the tree)
- >.name ,2,1228,0,0,84w127
- >.tre 216691
1487WW77,CID205626 0 216691 2 +-CID261218 0 216687 4 | +-CID261217 0 216685 8 | | +-SPICA,SPC,BW15695 1 7996< 9 | | +-TIMGALEN,TG,BW444,CID6634,W.3128 0 11825< 5 | +-TOSCA,TOSCA,CWI3956,CID247539 0 216686 10 | +-II7078,CID6665 0 351< 11 | +-NEWTHATCH,N,CWI12230 1 116< 3 +-CID261221,84 W 127 0 216690 6 +-CRANBROOK,CRBK,CWI32423,CM8954-0AUS[AUS] 1 216637 13 | +-CID7518 0 12658< 14 | +-ZAMBEZI,ZBZ,BW774,CID5856 0 11121< 7 +-CID261220,JACUP*2/BOBWHITE 0 216689 15 +-JACUP,JACUP,CWI25580 2 160402< 16 +-CID261219,JACUP/BOBWHITE 0 216688<
Now go to SETGEN and add the line 84 W 127-501 with unknown derivative method Save to GMS and return to BROWSE
- >84w127% (Search for lines from this cross)
- >.tre 216691
Step 4
- >.1 (Pick the first cross from the tree)
- >.set gpid2=-2 (Set the male parent to the new line)
- >.tre 216691
1487WW77,CID205626 0 216691 2 +-CID261218 0 216687 4 | +-CID261217 0 216685 9 | | +-SPICA,SPC,BW15695 1 7996< 10 | | +-TIMGALEN,TG,BW444,CID6634,W.3128 0 11825< 5 | +-TOSCA,TOSCA,CWI3956,CID247539 0 216686 11 | +-II7078,CID6665 0 351< 12 | +-NEWTHATCH,N,CWI12230 1 116< 3 +-84 W 127-501 ? -2 7 +-CRANBROOK,CRBK,CWI32423,CM8954-0AUS[AUS] 1 216637 14 | +-CID7518 0 12658< 15 | +-ZAMBEZI,ZBZ,BW774,CID5856 0 11121< 8 +-CID261220,JACUP*2/BOBWHITE 0 216689 16 +-JACUP,JACUP,CWI25580 2 160402< 17 +-CID261219,JACUP/BOBWHITE 0 216688<
- >.loc victoria (Look up the location number for Victoria)
- >.4 (Pick the line numbered 4 in the tree and add an unknown cross name)
- >.name ,3,1227,0,0,spica/timgalen
- >.2 (Pick the line numbered 2 in the tree)
- >.name ,2,1227,0,0,co1190 (Add a cross number)
- >.name ,3,1228,0,0,spica/timgalen//tosca (Add an unnamed cross name too)
Go to SETGEN and Add a new line CO1190-203 with unknown derivative method Save and Go back to BROWSE
- >co1190%
- >.2
Step 5
- >.1 (Pick the first cross from the tree and change the female parent to the new line)
- >.set gpid1=-3
- >westonia (Look for Westonia again)
- >.1
- >.set gpid1=216691 (Set the cross to the one just modified)
----------------------------------------------------------------- GID: 2447813 PREFERRED_NAME (TYPE=VARNM):WESTONIA CROSS: CO 1190-203/ 84 W 127-501 >.tre 1WESTONIA,CID391475 ? 2447813 3 +-CO 1190-203 ? -3 6 | +-CID261217,SPICA/TIMGALEN 0 216685 11 | | +-SPICA,SPC,BW15695 1 7996< 12 | | +-TIMGALEN,TG,BW444,CID6634,W.3128 0 11825< 7 | +-TOSCA,TOSCA,CWI3956,CID247539 0 216686 13 | +-II7078,CID6665 0 351< 14 | +-NEWTHATCH,N,CWI12230 1 116< 4 +-84 W 127-501 ? -2 9 +-CRANBROOK,CRBK,CWI32423,CM8954-0AUS[AUS] 1 216637 16 | +-CID7518 0 12658< 17 | +-ZAMBEZI,ZBZ,BW774,CID5856 0 11121< 10 +-CID261220,JACUP*2/BOBWHITE 0 216689 18 +-JACUP,JACUP,CWI25580 2 160402< 19 +-CID261219,JACUP/BOBWHITE 0 216688<
